Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--fructose-6-phosphate transaminase (isomerizing) | I596_RS14265 | Q88BX8 | Negative | 3500217 - 3502049 | 65883.3 |
| type ii secretion system inner membrane protein gspf | I596_RS14270 | Q00513 | Positive | 3502207 - 3503415 | 42704.7 |
| cell division atp-binding protein ftse | I596_RS14275 | P0A9R9 | Positive | 3503498 - 3504178 | 24683.4 |
| permease-like cell division protein ftsx | I596_RS14280 | Q9AGF2 | Positive | 3504175 - 3505173 | 34693.5 |
| response regulator | I596_RS14285 | Not Available | Positive | 3505170 - 3506012 | 30461.7 |
| uracil-dna glycosylase | I596_RS14290 | Q3BNI2 | Positive | 3506009 - 3506734 | 26662.0 |
| rna polymerase sigma factor rpoh | I596_RS14295 | P44404 | Positive | 3506926 - 3507801 | 32697.1 |
| primosomal protein n' | I596_RS14300 | P17888 | Negative | 3507874 - 3510081 | 79891.6 |
| duf3667 domain-containing protein | I596_RS18530 | Not Available | Negative | 3510439 - 3511701 | 45159.2 |
| mate family efflux transporter | I596_RS14310 | Q8P4E6 | Positive | 3511895 - 3513301 | 48975.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
