Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ion channel | I596_RS14215 | Not Available | Positive | 3483895 - 3484593 | 24598.6 |
| ntp transferase domain-containing protein | I596_RS14220 | Not Available | Negative | 3484610 - 3485203 | 19960.3 |
| xdhc family protein | I596_RS14225 | Not Available | Negative | 3485190 - 3486209 | 35048.3 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | I596_RS14230 | Not Available | Negative | 3486228 - 3488594 | 83033.0 |
| (2fe-2s)-binding protein | I596_RS14235 | Q51697 | Negative | 3488591 - 3489055 | 16234.7 |
| 3-oxoacid coa-transferase subunit b | I596_RS19260 | Q54JD9 | Negative | 3489300 - 3490655 | 47951.3 |
| hypothetical protein | I596_RS14245 | Not Available | Positive | 3490801 - 3491616 | 28803.1 |
| winged helix-turn-helix domain-containing protein | I596_RS14250 | Not Available | Positive | 3491777 - 3494254 | 87854.7 |
| fg-gap repeat protein | I596_RS14255 | Not Available | Positive | 3494442 - 3496910 | 84297.4 |
| hypothetical protein | I596_RS14260 | Not Available | Positive | 3496998 - 3500150 | 107407.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
