Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent 2,4-dienoyl-coa reductase | I596_RS14165 | P42593 | Positive | 3469130 - 3471148 | 72128.1 |
| sdr family nad(p)-dependent oxidoreductase | I596_RS14170 | P31808 | Negative | 3471158 - 3471928 | 26381.9 |
| grx4 family monothiol glutaredoxin | I596_RS14175 | P0AC71 | Negative | 3471925 - 3472242 | 11781.3 |
| fe-mn family superoxide dismutase | I596_RS14180 | P53641 | Positive | 3472493 - 3473071 | 21424.9 |
| glycosyltransferase | I596_RS18150 | P55465 | Negative | 3473268 - 3477593 | 154994.0 |
| penicillin-binding protein 1b | I596_RS14190 | Q9KUC0 | Positive | 3477691 - 3479997 | 83328.4 |
| hypothetical protein | I596_RS14195 | Not Available | Positive | 3479994 - 3480527 | 19041.9 |
| atp-dependent dna helicase | I596_RS14200 | P76257 | Positive | 3480539 - 3482509 | 70711.1 |
| hit family protein | I596_RS14205 | Not Available | Positive | 3482637 - 3483059 | 15083.1 |
| tigr00730 family rossman fold protein | I596_RS14210 | P48636 | Negative | 3483228 - 3483806 | 21172.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
