Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf47 domain-containing protein | I596_RS14115 | Not Available | Negative | 3458676 - 3459305 | 23628.4 |
| rna methyltransferase | I596_RS14120 | A0A0H2ZF87 | Negative | 3459478 - 3460248 | 27398.2 |
| inositol monophosphatase family protein | I596_RS14125 | Q87BG1 | Positive | 3460358 - 3461158 | 29390.2 |
| ompa family protein | I596_RS14130 | P13794 | Negative | 3461477 - 3462529 | 37551.7 |
| bifunctional 2-methylcitrate dehydratase/aconitate hydratase | I596_RS14135 | P74840 | Negative | 3462746 - 3464197 | 53208.5 |
| dioxygenase | I596_RS14140 | Q949R4 | Positive | 3464422 - 3465213 | 27914.2 |
| lysr family transcriptional regulator | I596_RS14145 | Not Available | Negative | 3465217 - 3466167 | 34384.5 |
| mfs transporter | I596_RS14150 | Not Available | Positive | 3466283 - 3467500 | 41751.2 |
| zinc-binding alcohol dehydrogenase family protein | I596_RS14155 | P63475 | Positive | 3467634 - 3468650 | 35979.2 |
| hypothetical protein | I596_RS14160 | Not Available | Negative | 3468660 - 3469034 | 13832.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
