Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | I596_RS13970 | Q8PHV2 | Positive | 3430790 - 3431836 | 38001.8 |
| tol-pal system-associated acyl-coa thioesterase | I596_RS13975 | P0A8Z5 | Positive | 3431829 - 3432254 | 16175.4 |
| protein tolq | I596_RS13980 | P0ABV0 | Positive | 3432251 - 3432937 | 25208.4 |
| protein tolr | I596_RS13985 | P50599 | Positive | 3432973 - 3433419 | 16235.0 |
| cell envelope integrity protein tola | I596_RS13990 | Not Available | Positive | 3433419 - 3434348 | 33720.0 |
| tol-pal system beta propeller repeat protein tolb | I596_RS13995 | Q8PHV7 | Positive | 3434392 - 3435669 | 45620.1 |
| peptidoglycan-associated lipoprotein pal | I596_RS14000 | Q51886 | Positive | 3435772 - 3436284 | 18363.4 |
| tol-pal system protein ybgf | I596_RS14005 | Not Available | Positive | 3436291 - 3437184 | 31275.5 |
| 7-carboxy-7-deazaguanine synthase quee | I596_RS14010 | Q2FS67 | Positive | 3437232 - 3437951 | 26620.0 |
| 7-cyano-7-deazaguanine synthase quec | I596_RS14015 | Q4UXK8 | Positive | 3437948 - 3438613 | 22922.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
