Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | I596_RS13920 | Not Available | Positive | 3418652 - 3421006 | 83106.5 |
| choice-of-anchor tandem repeat nxxgxxaf-containing protein | I596_RS13925 | Not Available | Negative | 3421026 - 3422918 | 63346.5 |
| fmdb family zinc ribbon protein | I596_RS13930 | Not Available | Positive | 3423201 - 3423524 | 11364.1 |
| duf3011 domain-containing protein | I596_RS13935 | Not Available | Positive | 3423608 - 3424165 | 20554.1 |
| aspartate--trna ligase | I596_RS13940 | B4ST40 | Positive | 3424300 - 3426069 | 65316.5 |
| alpha/beta fold hydrolase | I596_RS13945 | Not Available | Positive | 3426066 - 3426716 | 22673.6 |
| yebc/pmpr family dna-binding transcriptional regulator | I596_RS13950 | B2FRN8 | Positive | 3426753 - 3427493 | 26215.7 |
| crossover junction endodeoxyribonuclease ruvc | I596_RS13955 | Q4UXM1 | Positive | 3427551 - 3428105 | 19384.7 |
| holliday junction branch migration protein ruva | I596_RS13960 | Q3BQF2 | Positive | 3428102 - 3428692 | 20362.7 |
| potassium transporter kup | I596_RS13965 | Q4UXL9 | Positive | 3428829 - 3430706 | 68128.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
