Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 15 protein | I596_RS13870 | Q978S7 | Negative | 3399310 - 3401094 | 65848.7 |
| trehalose-phosphatase | I596_RS13875 | P55611 | Negative | 3401102 - 3401881 | 26819.3 |
| app1 family protein | I596_RS13880 | P53933 | Negative | 3401988 - 3403097 | 40418.5 |
| mgdg synthase family glycosyltransferase | I596_RS13885 | Q65IA4 | Negative | 3403084 - 3404211 | 40768.7 |
| glutathione s-transferase family protein | I596_RS13890 | Q9P6M1 | Negative | 3404258 - 3404929 | 24892.1 |
| atp-dependent chaperone clpb | I596_RS13895 | Q8P6A0 | Positive | 3405143 - 3407725 | 94937.0 |
| s-layer family protein | I596_RS13900 | Not Available | Positive | 3407949 - 3412166 | 137285.0 |
| vcbs repeat-containing protein | I596_RS13905 | Not Available | Positive | 3412405 - 3414576 | 77174.8 |
| glucosylglycerol-phosphate synthase | I596_RS13910 | Q93JY3 | Negative | 3414808 - 3417126 | 86104.5 |
| mfs transporter | I596_RS13915 | Not Available | Negative | 3417277 - 3418527 | 42799.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
