Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS13820 | Not Available | Negative | 3384415 - 3385881 | 52326.4 |
| choice-of-anchor q domain-containing protein | I596_RS13825 | Not Available | Negative | 3385961 - 3387478 | 49700.5 |
| serine/threonine-protein kinase | I596_RS13830 | Not Available | Negative | 3387626 - 3390502 | 103206.0 |
| ecf-type sigma factor | I596_RS13835 | Not Available | Negative | 3390502 - 3391065 | 21205.7 |
| hypothetical protein | I596_RS13840 | Not Available | Negative | 3391301 - 3393376 | 73059.5 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | I596_RS13845 | Q59637 | Positive | 3393567 - 3396290 | 101042.0 |
| duf4166 domain-containing protein | I596_RS13850 | Not Available | Positive | 3396248 - 3396874 | 22432.2 |
| thiol-disulfide oxidoreductase dcc family protein | I596_RS13855 | P40761 | Positive | 3396849 - 3397268 | 15467.8 |
| duf3224 domain-containing protein | I596_RS13860 | Not Available | Positive | 3397461 - 3397865 | 14007.5 |
| trehalose-6-phosphate synthase | I596_RS13865 | P55612 | Negative | 3397899 - 3399266 | 50340.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
