Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS13770 | Not Available | Positive | 3367487 - 3367993 | 16902.2 |
| ribosomal protein s18-alanine n-acetyltransferase | I596_RS13775 | P0A946 | Positive | 3367998 - 3368474 | 17707.3 |
| rhomboid family intramembrane serine protease | I596_RS13780 | Not Available | Positive | 3368584 - 3369192 | 22790.2 |
| s9 family peptidase | I596_RS13785 | Not Available | Negative | 3369236 - 3371353 | 76747.3 |
| dna polymerase iv | I596_RS13790 | B4SIF5 | Negative | 3371499 - 3372578 | 39746.8 |
| multidrug efflux smr transporter | I596_RS13795 | Q8XDQ5 | Positive | 3372789 - 3373109 | 10943.1 |
| efflux rnd transporter permease subunit | I596_RS13800 | B2K9M1 | Negative | 3374108 - 3377206 | 110418.0 |
| mdtb/muxb family multidrug efflux rnd transporter permease subunit | I596_RS13805 | A8GHQ9 | Negative | 3377259 - 3380384 | 110638.0 |
| mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunit | I596_RS13810 | Q7N3E3 | Negative | 3380381 - 3381571 | 42509.6 |
| nadp-dependent malic enzyme | I596_RS13815 | P76558 | Positive | 3381928 - 3384219 | 82781.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
