Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circularly permuted type 2 atp-grasp protein | I596_RS13720 | Q55587 | Positive | 3357316 - 3358761 | 53722.7 |
| alpha-e domain-containing protein | I596_RS13725 | Not Available | Positive | 3358761 - 3359717 | 35430.7 |
| duf937 domain-containing protein | I596_RS13730 | Not Available | Negative | 3359768 - 3360373 | 19776.6 |
| hpt domain-containing protein | I596_RS13735 | Not Available | Positive | 3360558 - 3361313 | 27076.2 |
| arginase | I596_RS13740 | P53608 | Positive | 3361481 - 3362404 | 33099.8 |
| h-ns family nucleoid-associated regulatory protein | I596_RS13745 | P42505 | Negative | 3362513 - 3362836 | 12041.5 |
| hypothetical protein | I596_RS13750 | Not Available | Positive | 3363171 - 3363998 | 31051.4 |
| proline--trna ligase | I596_RS13755 | B8GPP4 | Negative | 3364048 - 3365745 | 62237.4 |
| duf4124 domain-containing protein | I596_RS18800 | Not Available | Negative | 3365914 - 3366369 | 15561.3 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | I596_RS13765 | Q9ZM68 | Positive | 3366665 - 3367450 | 28332.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
