Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS18525 | Not Available | Negative | 3319323 - 3320114 | 30127.8 |
| nrdjb | I596_RS13575 | Not Available | Negative | 3320123 - 3320905 | 28001.8 |
| hypothetical protein | I596_RS18790 | Not Available | Negative | 3321033 - 3321695 | 22382.2 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | I596_RS13585 | Q9HI70 | Negative | 3321742 - 3323886 | 80408.1 |
| degq family serine endoprotease | I596_RS13590 | P39099 | Positive | 3324428 - 3325834 | 48232.1 |
| substrate-binding domain-containing protein | I596_RS13595 | Q97Q31 | Positive | 3325966 - 3327207 | 43305.9 |
| had family hydrolase | I596_RS13600 | Not Available | Positive | 3327239 - 3327934 | 25835.5 |
| m17 family metallopeptidase | I596_RS13605 | Q3A831 | Positive | 3327965 - 3329347 | 48655.5 |
| hypothetical protein | I596_RS13610 | Not Available | Negative | 3329390 - 3330541 | 39482.5 |
| fic family protein | I596_RS13615 | Q8E9K5 | Positive | 3330862 - 3332037 | 42801.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
