Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase | I596_RS13445 | Not Available | Negative | 3284286 - 3285656 | 48710.9 |
| lyse family translocator | I596_RS13450 | Not Available | Negative | 3285863 - 3286465 | 21106.6 |
| plp-dependent aminotransferase family protein | I596_RS13455 | Not Available | Positive | 3286578 - 3288059 | 53162.6 |
| class i sam-dependent methyltransferase | I596_RS13460 | Not Available | Negative | 3288050 - 3288733 | 24094.7 |
| pyridoxine/pyridoxal/pyridoxamine kinase | I596_RS13465 | Q7WII1 | Negative | 3288945 - 3290051 | 39052.1 |
| yggs family pyridoxal phosphate-dependent enzyme | I596_RS13470 | Not Available | Negative | 3290048 - 3290875 | 29795.4 |
| transcriptional regulator ptsj | I596_RS13475 | P40193 | Positive | 3290973 - 3292280 | 45580.9 |
| alpha/beta fold hydrolase | I596_RS13480 | Not Available | Negative | 3292324 - 3293136 | 29618.1 |
| phospholipase d-like domain-containing protein | I596_RS13485 | Not Available | Positive | 3293232 - 3294605 | 52165.8 |
| hypothetical protein | I596_RS13490 | Not Available | Positive | 3294767 - 3295234 | 16692.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
