Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | I596_RS13395 | Not Available | Negative | 3268382 - 3270427 | 73817.5 |
| s8 family serine peptidase | I596_RS13400 | Not Available | Negative | 3270566 - 3274231 | 126001.0 |
| duf4394 domain-containing protein | I596_RS13405 | Not Available | Negative | 3274355 - 3276697 | 80485.3 |
| winged helix-turn-helix domain-containing protein | I596_RS13410 | Not Available | Negative | 3276891 - 3279332 | 86731.0 |
| cytochrome c3 family protein | I596_RS13415 | Q56352 | Negative | 3279462 - 3280061 | 22689.0 |
| nitrate reductase cytochrome c-type subunit | I596_RS13420 | P39186 | Negative | 3280065 - 3280628 | 20117.0 |
| periplasmic nitrate reductase subunit alpha | I596_RS13425 | Q7WIQ1 | Negative | 3280641 - 3283133 | 92327.8 |
| chaperone napd | I596_RS13430 | Not Available | Negative | 3283130 - 3283432 | 10495.7 |
| ferredoxin-type protein napf | I596_RS13435 | Not Available | Negative | 3283429 - 3283866 | 14845.0 |
| periplasmic nitrate reductase, nape protein | I596_RS13440 | Not Available | Negative | 3283936 - 3284100 | 5869.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
