Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mipa/ompv family protein | I596_RS13290 | Not Available | Positive | 3242427 - 3243227 | 28975.2 |
| response regulator transcription factor | I596_RS13295 | E1WA34 | Positive | 3243277 - 3243963 | 24863.5 |
| sensor histidine kinase kdpd | I596_RS13300 | Q8ZLZ9 | Positive | 3244001 - 3245311 | 46874.5 |
| hypothetical protein | I596_RS13305 | Not Available | Positive | 3245308 - 3245556 | 9073.94 |
| ankyrin repeat domain-containing protein | I596_RS13310 | Not Available | Positive | 3245841 - 3247487 | 58333.0 |
| hypothetical protein | I596_RS13315 | Not Available | Negative | 3247563 - 3248261 | 23786.9 |
| hypothetical protein | I596_RS13320 | Not Available | Positive | 3248698 - 3249414 | 26256.2 |
| l,d-transpeptidase | I596_RS13325 | Not Available | Positive | 3249472 - 3250485 | 35843.0 |
| is30 family transposase | I596_RS13330 | P0CF88 | Positive | 3250811 - 3251971 | 44520.3 |
| aaa family atpase | I596_RS13335 | Q58914 | Positive | 3252072 - 3255761 | 136845.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
