Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | I596_RS13245 | Not Available | Negative | 3227156 - 3229540 | 84970.3 |
| tonb-dependent copper receptor | I596_RS13250 | Not Available | Positive | 3229903 - 3231972 | 74090.3 |
| abc-f family atp-binding cassette domain-containing protein | I596_RS13255 | P9WQK2 | Negative | 3232251 - 3233861 | 57420.6 |
| type 1 glutamine amidotransferase domain-containing protein | I596_RS13260 | Q04432 | Positive | 3234313 - 3235425 | 39081.6 |
| response regulator transcription factor | I596_RS13265 | A1TEL7 | Positive | 3235429 - 3236115 | 25362.0 |
| hamp domain-containing sensor histidine kinase | I596_RS13270 | Not Available | Positive | 3236112 - 3237380 | 45737.0 |
| voc family protein | I596_RS13275 | Not Available | Positive | 3237452 - 3237880 | 15296.8 |
| hypothetical protein | I596_RS18780 | Not Available | Negative | 3237944 - 3238081 | 4810.98 |
| alpha/beta hydrolase | I596_RS13280 | Not Available | Positive | 3238176 - 3239237 | 37955.8 |
| serine/threonine-protein kinase | I596_RS13285 | Not Available | Negative | 3239271 - 3242126 | 103096.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
