Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | I596_RS13195 | Q9Z3Q0 | Positive | 3209250 - 3211283 | 75069.9 |
| amidohydrolase family protein | I596_RS13200 | Not Available | Negative | 3211392 - 3212729 | 48759.1 |
| s9 family peptidase | I596_RS13205 | Not Available | Negative | 3212751 - 3214049 | 46217.6 |
| serine hydrolase | I596_RS13210 | Not Available | Negative | 3214127 - 3215935 | 64777.1 |
| ankyrin repeat domain-containing protein | I596_RS13215 | Not Available | Negative | 3215988 - 3216671 | 23784.2 |
| helix-turn-helix domain-containing protein | I596_RS13220 | Not Available | Negative | 3216827 - 3217711 | 33055.1 |
| m20/m25/m40 family metallo-hydrolase | I596_RS13225 | Q01693 | Positive | 3218217 - 3219518 | 46183.3 |
| hypothetical protein | I596_RS13230 | Not Available | Negative | 3219999 - 3221084 | 36424.4 |
| delta-60 repeat domain-containing protein | I596_RS13235 | Not Available | Negative | 3221162 - 3223735 | 87637.0 |
| choice-of-anchor j domain-containing protein | I596_RS13240 | Not Available | Negative | 3223817 - 3226894 | 107628.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
