Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS13145 | Not Available | Positive | 3195039 - 3196140 | 38876.1 |
| hypothetical protein | I596_RS13150 | Not Available | Negative | 3196297 - 3197565 | 47572.6 |
| sensor histidine kinase | I596_RS19230 | Not Available | Negative | 3197562 - 3199742 | 81746.3 |
| class i sam-dependent methyltransferase | I596_RS13160 | Not Available | Negative | 3199790 - 3201127 | 49747.9 |
| hypothetical protein | I596_RS13165 | Not Available | Positive | 3201512 - 3202699 | 44055.4 |
| dyp-type peroxidase | I596_RS13170 | Q743F4 | Positive | 3203100 - 3204074 | 35503.3 |
| hypothetical protein | I596_RS13175 | Not Available | Negative | 3204316 - 3204720 | 14877.5 |
| tetratricopeptide repeat protein | I596_RS13180 | Not Available | Positive | 3205158 - 3206825 | 59785.6 |
| hypothetical protein | I596_RS13185 | Not Available | Positive | 3207223 - 3207831 | 20884.0 |
| duf2306 domain-containing protein | I596_RS13190 | Not Available | Negative | 3208185 - 3209054 | 31629.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
