Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine(20/20a) synthase dusa | I596_RS13095 | Q8EAJ0 | Negative | 3186726 - 3187733 | 36975.4 |
| site-specific integrase | I596_RS13100 | P10487 | Positive | 3187830 - 3189071 | 47226.3 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS13105 | Not Available | Positive | 3189151 - 3189483 | 12655.3 |
| helix-turn-helix domain-containing protein | I596_RS13110 | Not Available | Positive | 3189480 - 3189764 | 10297.4 |
| hypothetical protein | I596_RS13115 | Not Available | Negative | 3189836 - 3190390 | 20817.8 |
| hypothetical protein | I596_RS18505 | Not Available | Negative | 3190585 - 3191115 | 18670.6 |
| duf2274 domain-containing protein | I596_RS13125 | Not Available | Negative | 3191969 - 3192163 | 7123.71 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS19005 | Not Available | Negative | 3192162 - 3192506 | 12850.5 |
| radc family protein | I596_RS13130 | Q9KR57 | Negative | 3192768 - 3193277 | 18619.5 |
| rela/spot domain-containing protein | I596_RS13135 | Not Available | Positive | 3193850 - 3194758 | 34512.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
