Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mred | I596_RS13045 | P44476 | Positive | 3174532 - 3175023 | 18258.1 |
| penicillin-binding protein 2 | I596_RS13050 | P0AD67 | Positive | 3175020 - 3176903 | 68878.5 |
| rod shape-determining protein roda | I596_RS13055 | P0ABG8 | Positive | 3176903 - 3178009 | 40109.0 |
| pqq-binding-like beta-propeller repeat protein | I596_RS13060 | Not Available | Negative | 3178025 - 3180949 | 103916.0 |
| set domain-containing protein | I596_RS13065 | C6KTD2 | Positive | 3181178 - 3181657 | 17971.5 |
| hypothetical protein | I596_RS13070 | Not Available | Positive | 3181797 - 3183029 | 44050.5 |
| class i sam-dependent methyltransferase | I596_RS13075 | Not Available | Positive | 3183154 - 3183798 | 22833.1 |
| hypothetical protein | I596_RS13080 | Not Available | Negative | 3184031 - 3184429 | 13913.6 |
| hypothetical protein | I596_RS13085 | Not Available | Negative | 3184426 - 3185541 | 38798.7 |
| hypothetical protein | I596_RS13090 | Not Available | Negative | 3185591 - 3186328 | 25331.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
