Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphohydrolase | I596_RS12995 | P0AEY4 | Negative | 3161741 - 3162535 | 29225.3 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | I596_RS13000 | Q8XCG6 | Negative | 3162552 - 3163361 | 28844.3 |
| adp compounds hydrolase nude | I596_RS13005 | P45799 | Negative | 3163352 - 3163912 | 20991.2 |
| s41 family peptidase | I596_RS13010 | Not Available | Positive | 3164182 - 3167502 | 120675.0 |
| carbohydrate kinase family protein | I596_RS13015 | P83736 | Negative | 3168052 - 3168987 | 34764.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | I596_RS13020 | B8GL96 | Negative | 3169094 - 3170536 | 51406.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | I596_RS13025 | Q60CK8 | Negative | 3170533 - 3171957 | 49285.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | I596_RS13030 | B4R967 | Negative | 3171954 - 3172241 | 10172.3 |
| rod shape-determining protein | I596_RS13035 | P0A9X5 | Positive | 3172443 - 3173489 | 37203.9 |
| rod shape-determining protein mrec | I596_RS13040 | P44475 | Positive | 3173627 - 3174535 | 31803.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
