Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase n-terminal domain-containing protein | I596_RS12945 | P53605 | Positive | 3151443 - 3152096 | 23266.8 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS12950 | Not Available | Positive | 3152225 - 3153051 | 29854.7 |
| sulfurtransferase | I596_RS12955 | Q9I452 | Positive | 3153048 - 3153899 | 29171.7 |
| iron-sulfur cluster carrier protein apbc | I596_RS12960 | P72190 | Negative | 3153949 - 3155040 | 37889.9 |
| methionine--trna ligase | I596_RS12965 | B4SRG1 | Positive | 3155151 - 3157286 | 77236.2 |
| hypothetical protein | I596_RS12970 | Not Available | Positive | 3157298 - 3157846 | 20014.3 |
| rnfabcdge type electron transport complex subunit b | I596_RS12975 | A1K5F2 | Positive | 3157843 - 3158487 | 22201.8 |
| endonuclease iii | I596_RS12980 | P0AB84 | Positive | 3158484 - 3159119 | 23266.5 |
| duf2807 domain-containing protein | I596_RS12985 | Not Available | Negative | 3159171 - 3159995 | 27846.6 |
| na+/h+ antiporter | I596_RS12990 | P32703 | Negative | 3160094 - 3161728 | 58311.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
