Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2167 domain-containing protein | I596_RS12845 | Not Available | Positive | 3131874 - 3132752 | 31499.4 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | I596_RS12850 | Not Available | Negative | 3132787 - 3135066 | 81038.5 |
| (2fe-2s)-binding protein | I596_RS12855 | Not Available | Negative | 3135063 - 3135599 | 19259.4 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | I596_RS12860 | P37995 | Negative | 3136127 - 3136861 | 25976.5 |
| hypothetical protein | I596_RS12865 | Not Available | Negative | 3136903 - 3137529 | 22977.2 |
| rna polymerase sigma factor | I596_RS12870 | Not Available | Negative | 3137526 - 3138065 | 19704.4 |
| gnat family n-acetyltransferase | I596_RS12875 | P94562 | Positive | 3138188 - 3138649 | 16853.0 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | I596_RS12880 | P22805 | Negative | 3138660 - 3140018 | 48976.1 |
| type ii secretion system major pseudopilin gspg | I596_RS12885 | Not Available | Positive | 3140066 - 3140512 | 16205.4 |
| type ii secretion system minor pseudopilin gsph | I596_RS12890 | Not Available | Positive | 3140534 - 3141064 | 18922.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
