Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS12795 | Not Available | Positive | 3121795 - 3122376 | 20232.3 |
| pdz domain-containing protein | I596_RS12800 | Not Available | Positive | 3122404 - 3123627 | 43134.5 |
| yebc/pmpr family dna-binding transcriptional regulator | I596_RS12805 | Q4UXM2 | Negative | 3123668 - 3124387 | 25169.6 |
| endonuclease/exonuclease/phosphatase family protein | I596_RS12810 | Not Available | Negative | 3124529 - 3125428 | 32314.7 |
| elongation factor g | I596_RS12815 | Q5SHN5 | Negative | 3125564 - 3127612 | 73361.6 |
| alpha/beta fold hydrolase | I596_RS12820 | Not Available | Positive | 3127928 - 3128638 | 24108.2 |
| sensor domain-containing diguanylate cyclase | I596_RS12825 | Q9ABX9 | Negative | 3128648 - 3129493 | 29891.9 |
| helix-turn-helix transcriptional regulator | I596_RS12830 | Not Available | Positive | 3129653 - 3130030 | 13661.4 |
| hypothetical protein | I596_RS12835 | Not Available | Positive | 3130151 - 3130882 | 26494.6 |
| hypothetical protein | I596_RS12840 | Not Available | Positive | 3130916 - 3131788 | 30627.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
