Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| psts family phosphate abc transporter substrate-binding protein | I596_RS12745 | Not Available | Positive | 3108136 - 3109050 | 31636.9 |
| polyphosphate kinase 1 | I596_RS12750 | Q9PAC7 | Positive | 3109053 - 3111131 | 78721.0 |
| exopolyphosphatase | I596_RS12755 | Q9ZN70 | Positive | 3111230 - 3112741 | 55413.7 |
| is481 family transposase | I596_RS12760 | P37007 | Positive | 3113355 - 3114479 | 42561.0 |
| sigma-54 dependent transcriptional regulator | I596_RS12765 | P23747 | Negative | 3114937 - 3116292 | 48990.4 |
| abc transporter permease | I596_RS12770 | O31712 | Negative | 3116363 - 3117583 | 43805.4 |
| abc transporter permease | I596_RS12775 | Q6MPX9 | Negative | 3117598 - 3118902 | 48365.4 |
| abc transporter atp-binding protein | I596_RS12780 | Not Available | Negative | 3118913 - 3119641 | 26772.1 |
| efflux rnd transporter periplasmic adaptor subunit | I596_RS12785 | Not Available | Negative | 3119730 - 3120968 | 44616.7 |
| rna polymerase sigma factor | I596_RS12790 | Not Available | Positive | 3121238 - 3121816 | 21660.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
