Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | I596_RS12645 | Q0AB69 | Negative | 3088529 - 3089353 | 28159.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | I596_RS12650 | Q9HV71 | Negative | 3089432 - 3089935 | 18222.0 |
| polynucleotide adenylyltransferase pcnb | I596_RS12655 | Q8Z9C3 | Negative | 3089932 - 3091335 | 51980.9 |
| Trna-glu | Not Available | Not Available | Positive | 3091449 - 3091524 | Not Available |
| ferredoxin fdxa | I596_RS12665 | P0A122 | Positive | 3091570 - 3091893 | 11810.0 |
| hypothetical protein | I596_RS18775 | Not Available | Negative | 3091994 - 3092656 | 22694.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | I596_RS12675 | B2FL61 | Negative | 3092684 - 3093598 | 31893.5 |
| glycine cleavage system protein r | I596_RS12680 | Not Available | Positive | 3093865 - 3094425 | 20190.4 |
| peroxiredoxin | I596_RS12685 | Q8P9V9 | Positive | 3094480 - 3094941 | 16971.3 |
| phoh family protein | I596_RS12690 | O07635 | Positive | 3095024 - 3096424 | 52888.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
