Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease mutl | I596_RS12595 | A4VQP2 | Negative | 3072839 - 3074653 | 65510.6 |
| n-acetylmuramoyl-l-alanine amidase | I596_RS12600 | P63884 | Negative | 3074821 - 3076149 | 47706.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | I596_RS12605 | P0AF68 | Negative | 3076238 - 3076720 | 16614.0 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | I596_RS12610 | Q83CM5 | Negative | 3076717 - 3078198 | 49686.1 |
| trna epoxyqueuosine(34) reductase queg | I596_RS12615 | Q8P8E0 | Positive | 3078220 - 3079344 | 41071.0 |
| kelch repeat-containing protein | I596_RS12620 | Not Available | Negative | 3079394 - 3082537 | 106165.0 |
| winged helix-turn-helix domain-containing protein | I596_RS12625 | Not Available | Negative | 3082739 - 3085042 | 81237.2 |
| glucose-6-phosphate isomerase | I596_RS12630 | A3NAH2 | Negative | 3085039 - 3086688 | 58809.7 |
| aspartate 1-decarboxylase | I596_RS12635 | Q605G8 | Negative | 3086823 - 3087203 | 13780.4 |
| pantoate--beta-alanine ligase | I596_RS12640 | B2FL68 | Negative | 3087678 - 3088526 | 30241.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
