Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | I596_RS12545 | P24230 | Positive | 3062567 - 3064669 | 75876.6 |
| nucleoside hydrolase | I596_RS12550 | B5R1P1 | Positive | 3064717 - 3065640 | 32817.6 |
| type b 50s ribosomal protein l31 | I596_RS12555 | Q8PH70 | Positive | 3065742 - 3065990 | 9426.18 |
| citrate synthase | I596_RS12560 | P51037 | Positive | 3066308 - 3067600 | 47518.1 |
| mosc domain-containing protein | I596_RS12565 | P75863 | Negative | 3067670 - 3068467 | 28774.7 |
| ntp/ndp exchange transporter | I596_RS12570 | Not Available | Positive | 3068570 - 3069886 | 47573.2 |
| ynfa family protein | I596_RS12575 | A1W7N8 | Positive | 3069891 - 3070217 | 11664.8 |
| s-formylglutathione hydrolase | I596_RS12580 | Q9R0P3 | Positive | 3070241 - 3071086 | 30326.0 |
| hypothetical protein | I596_RS12585 | Not Available | Negative | 3071141 - 3071761 | 22482.4 |
| duf1684 domain-containing protein | I596_RS12590 | Not Available | Negative | 3071832 - 3072728 | 32319.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
