Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence factor brkb family protein | I596_RS12495 | B2FQ10 | Negative | 3053836 - 3055065 | 45426.4 |
| nad(p)h:quinone oxidoreductase | I596_RS12500 | Q9I509 | Positive | 3055144 - 3055743 | 20624.9 |
| duf2069 domain-containing protein | I596_RS12505 | Not Available | Positive | 3055740 - 3056099 | 12506.8 |
| lysr substrate-binding domain-containing protein | I596_RS12510 | P72131 | Negative | 3056100 - 3057071 | 35317.1 |
| fmn-dependent nadh-azoreductase | I596_RS12515 | Q3BUY7 | Positive | 3057183 - 3057743 | 19908.7 |
| asparaginase domain-containing protein | I596_RS12520 | Not Available | Positive | 3057834 - 3058322 | 17724.2 |
| vacj family lipoprotein | I596_RS12525 | Not Available | Negative | 3058410 - 3059222 | 30636.5 |
| dna-directed rna polymerase subunit omega | I596_RS12530 | P66732 | Positive | 3059562 - 3059855 | 10854.8 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | I596_RS12535 | P0AG25 | Positive | 3059925 - 3062072 | 80178.8 |
| rida family protein | I596_RS12540 | P40431 | Positive | 3062167 - 3062547 | 13106.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
