Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | I596_RS12445 | Q2NZW6 | Negative | 3043386 - 3044279 | 31478.5 |
| lipoprotein insertase outer membrane protein lolb | I596_RS12450 | Not Available | Negative | 3044276 - 3044878 | 22250.4 |
| tetratricopeptide repeat protein | I596_RS12455 | P42810 | Negative | 3044875 - 3046569 | 61085.3 |
| glutamyl-trna reductase | I596_RS12460 | B4SKS9 | Positive | 3047151 - 3048416 | 46159.3 |
| peptide chain release factor 1 | I596_RS12465 | B2FQ14 | Positive | 3048413 - 3049495 | 40105.1 |
| tetratricopeptide repeat protein | I596_RS12470 | Q9M8Y0 | Positive | 3049605 - 3051695 | 73889.9 |
| molybdenum cofactor biosynthesis protein b | I596_RS12475 | P0AF00 | Positive | 3051692 - 3052213 | 19093.8 |
| polyphosphate kinase 2 | I596_RS12480 | Q9I154 | Positive | 3052225 - 3052992 | 29789.7 |
| acylphosphatase | I596_RS12485 | A1WUX3 | Negative | 3053074 - 3053340 | 9456.34 |
| tlpa disulfide reductase family protein | I596_RS12490 | Not Available | Negative | 3053348 - 3053806 | 16165.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
