Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 3027849 - 3027922 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 3028034 - 3028173 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 3028218 - 3028303 | Not Available |
| winged helix-turn-helix domain-containing protein | I596_RS12410 | Not Available | Positive | 3028921 - 3031350 | 87349.1 |
| s8 family serine peptidase | I596_RS12415 | Not Available | Positive | 3031741 - 3038700 | 239152.0 |
| redox-regulated atpase ychf | I596_RS12420 | Q7VMI2 | Negative | 3039718 - 3040809 | 39434.5 |
| aminoacyl-trna hydrolase | I596_RS12425 | B4SKT5 | Negative | 3040856 - 3041446 | 21207.5 |
| 50s ribosomal protein l25/general stress protein ctc | I596_RS12430 | B0RU99 | Negative | 3041471 - 3042121 | 24012.0 |
| ribose-phosphate diphosphokinase | I596_RS12435 | Q8PNU0 | Negative | 3042223 - 3043182 | 33978.0 |
| Trna-gln | Not Available | Not Available | Positive | 3043241 - 3043315 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
