Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | I596_RS12345 | B2FQ38 | Negative | 3018336 - 3022493 | 154442.0 |
| 50s ribosomal protein l7/l12 | I596_RS12350 | B4SKV5 | Negative | 3022736 - 3023113 | 12937.7 |
| 50s ribosomal protein l10 | I596_RS12355 | Q2NZX6 | Negative | 3023174 - 3023698 | 18424.5 |
| 50s ribosomal protein l1 | I596_RS12360 | Q8PNT3 | Negative | 3024028 - 3024726 | 23941.1 |
| 50s ribosomal protein l11 | I596_RS12365 | B4SKV2 | Negative | 3024731 - 3025159 | 14846.3 |
| transcription termination/antitermination protein nusg | I596_RS12370 | Q87A27 | Negative | 3025336 - 3025896 | 21159.4 |
| preprotein translocase subunit sece | I596_RS12375 | Q9HWC3 | Negative | 3025910 - 3026299 | 13932.6 |
| Trna-trp | Not Available | Not Available | Positive | 3026312 - 3026387 | Not Available |
| elongation factor tu | I596_RS12385 | Q8NL22 | Negative | 3026482 - 3027672 | 43097.9 |
| Trna-thr | Not Available | Not Available | Positive | 3027709 - 3027784 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
