Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l2 | I596_RS12295 | Q8PNS1 | Negative | 3006652 - 3007479 | 29859.0 |
| 50s ribosomal protein l23 | I596_RS12300 | Q4URE1 | Negative | 3007494 - 3007784 | 10689.0 |
| 50s ribosomal protein l4 | I596_RS12305 | B4SKW4 | Negative | 3007781 - 3008383 | 21545.2 |
| 50s ribosomal protein l3 | I596_RS12310 | Q8PNS4 | Negative | 3008394 - 3009038 | 22810.6 |
| 30s ribosomal protein s10 | I596_RS12315 | Q4URD8 | Negative | 3009060 - 3009371 | 11707.2 |
| elongation factor tu | I596_RS12320 | Not Available | Negative | 3009673 - 3010863 | 43083.9 |
| elongation factor g | I596_RS12325 | Q8PNS6 | Negative | 3010953 - 3013043 | 76626.8 |
| 30s ribosomal protein s7 | I596_RS12330 | Q2NZY1 | Negative | 3013071 - 3013538 | 17144.9 |
| 30s ribosomal protein s12 | I596_RS12335 | Q4URD4 | Negative | 3013559 - 3013933 | 13823.8 |
| dna-directed rna polymerase subunit beta' | I596_RS12340 | B2FQ39 | Negative | 3014095 - 3018309 | 154963.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
