Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | I596_RS01195 | Q796P5 | Positive | 300770 - 302200 | 53348.6 |
| ecf-type sigma factor | I596_RS01200 | Not Available | Negative | 302380 - 302979 | 21565.8 |
| tetratricopeptide repeat protein | I596_RS01205 | Not Available | Negative | 303034 - 305901 | 101055.0 |
| hypothetical protein | I596_RS01210 | Not Available | Negative | 305987 - 307462 | 50749.6 |
| hypothetical protein | I596_RS01215 | Not Available | Positive | 307671 - 309275 | 54994.2 |
| serine/threonine-protein kinase | I596_RS01220 | P0A5S5 | Negative | 309420 - 312173 | 98909.8 |
| ecf-type sigma factor | I596_RS01225 | Not Available | Negative | 312170 - 312733 | 20555.4 |
| ribonuclease h-like domain-containing protein | I596_RS01230 | Not Available | Negative | 313261 - 314058 | 28785.4 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS01235 | P50830 | Negative | 314055 - 316382 | 84432.6 |
| type ii toxin-antitoxin system pemk/mazf family toxin | I596_RS17925 | Not Available | Positive | 316558 - 317004 | 17341.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
