Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rne/rng family ribonuclease | I596_RS12145 | P44443 | Positive | 2983303 - 2986368 | 106356.0 |
| response regulator | I596_RS12150 | Q51373 | Negative | 2986524 - 2987174 | 23699.2 |
| Trna-ser | Not Available | Not Available | Positive | 2987442 - 2987531 | Not Available |
| had-ia family hydrolase | I596_RS12160 | Q04541 | Negative | 2987776 - 2988555 | 28069.6 |
| amidohydrolase family protein | I596_RS12165 | Not Available | Negative | 2988652 - 2989953 | 45782.9 |
| amidohydrolase family protein | I596_RS12170 | Not Available | Negative | 2989953 - 2993096 | 111787.0 |
| class ii 3-deoxy-7-phosphoheptulonate synthase | I596_RS12175 | A0A067XGX8 | Negative | 2993318 - 2994709 | 51591.0 |
| disulfide bond formation protein b | I596_RS12180 | Q4URG5 | Negative | 2994784 - 2995302 | 18914.5 |
| 50s ribosomal protein l17 | I596_RS12185 | Q8PNQ7 | Negative | 2995453 - 2995842 | 14649.0 |
| dna-directed rna polymerase subunit alpha | I596_RS12190 | B2FQK8 | Negative | 2996155 - 2997153 | 36347.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
