Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf885 family protein | I596_RS12095 | Not Available | Negative | 2971717 - 2973546 | 68992.5 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | I596_RS12100 | P37634 | Positive | 2973689 - 2974537 | 30711.1 |
| slp family lipoprotein | I596_RS12105 | Not Available | Positive | 2974591 - 2975094 | 18519.4 |
| mmcq/yjbr family dna-binding protein | I596_RS12110 | Not Available | Negative | 2975110 - 2975481 | 13845.8 |
| gnat family n-acetyltransferase | I596_RS12115 | Not Available | Positive | 2975626 - 2976195 | 20841.9 |
| transcription-repair coupling factor | I596_RS12120 | P30958 | Positive | 2976897 - 2980358 | 127963.0 |
| cupin domain-containing protein | I596_RS12125 | Not Available | Positive | 2980388 - 2980861 | 16903.3 |
| nfua family fe-s biogenesis protein | I596_RS12130 | Q3BSV3 | Negative | 2980960 - 2981556 | 21335.1 |
| 4a-hydroxytetrahydrobiopterin dehydratase | I596_RS12135 | Q4UUW5 | Positive | 2981633 - 2981971 | 12559.0 |
| rlua family pseudouridine synthase | I596_RS12140 | Q8ZQ16 | Negative | 2981964 - 2982923 | 35157.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
