Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter atp-binding protein | I596_RS12045 | Q6D2D5 | Negative | 2959625 - 2960431 | 29798.0 |
| abc transporter permease subunit | I596_RS12050 | P46339 | Negative | 2960439 - 2961701 | 44129.6 |
| pstc family abc transporter permease | I596_RS12055 | P0A631 | Negative | 2961698 - 2962756 | 36858.6 |
| glycosyltransferase family 1 protein | I596_RS12060 | A0QRG8 | Positive | 2962892 - 2964028 | 41753.2 |
| phosphatase pap2 family protein | I596_RS12065 | Not Available | Positive | 2964028 - 2964585 | 20096.1 |
| hypothetical protein | I596_RS12070 | Not Available | Negative | 2964606 - 2965298 | 24385.5 |
| hypothetical protein | I596_RS12075 | Not Available | Negative | 2965441 - 2967123 | 59744.6 |
| transcriptional regulator | I596_RS12080 | Not Available | Negative | 2967404 - 2969803 | 85993.1 |
| carbon-nitrogen hydrolase family protein | I596_RS12085 | P54608 | Negative | 2970053 - 2970934 | 31343.2 |
| gnat family n-acetyltransferase | I596_RS12090 | Not Available | Negative | 2970937 - 2971539 | 22645.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
