Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pd40 domain-containing protein | I596_RS11990 | Not Available | Positive | 2947935 - 2949308 | 47051.4 |
| tetratricopeptide repeat protein | I596_RS11995 | Not Available | Positive | 2949488 - 2951554 | 75640.0 |
| hypothetical protein | I596_RS12005 | Not Available | Positive | 2951766 - 2952746 | 34603.0 |
| Trna-phe | Not Available | Not Available | Positive | 2953020 - 2953095 | Not Available |
| ribonuclease d | I596_RS12015 | Q5GZ75 | Positive | 2953301 - 2954401 | 40802.0 |
| isovaleryl-coa dehydrogenase | I596_RS12020 | P33224 | Positive | 2954495 - 2956159 | 60530.5 |
| glycine zipper 2tm domain-containing protein | I596_RS12025 | Not Available | Negative | 2956223 - 2956792 | 20650.3 |
| cysteine--trna ligase | I596_RS12030 | Q4UVJ3 | Positive | 2956993 - 2958390 | 50930.5 |
| sufe family protein | I596_RS12035 | Q6D624 | Positive | 2958374 - 2958817 | 15897.0 |
| phosphate signaling complex protein phou | I596_RS12040 | Q51547 | Negative | 2958879 - 2959601 | 26993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
