Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rata family toxin | I596_RS11940 | Not Available | Negative | 2935874 - 2936305 | 16181.4 |
| ssra-binding protein smpb | I596_RS11945 | B2I6G4 | Positive | 2936389 - 2936877 | 18532.3 |
| Tmrna,resume consensus sequence (at 87): tatagttgccaacgacga | Not Available | Not Available | Positive | 2937070 - 2937424 | Not Available |
| yafy family protein | I596_RS11955 | Not Available | Negative | 2937582 - 2938559 | 35600.1 |
| glutathione s-transferase family protein | I596_RS11960 | P42761 | Positive | 2938653 - 2939261 | 21880.4 |
| hypothetical protein | I596_RS11965 | Not Available | Positive | 2940061 - 2940354 | 10480.6 |
| reprolysin-like metallopeptidase | I596_RS11970 | Not Available | Positive | 2940676 - 2942670 | 73729.3 |
| ecf-type sigma factor | I596_RS11975 | Not Available | Positive | 2943028 - 2943663 | 23123.9 |
| serine/threonine-protein kinase | I596_RS11980 | Not Available | Positive | 2943656 - 2946283 | 95459.2 |
| right-handed parallel beta-helix repeat-containing protein | I596_RS11985 | Not Available | Positive | 2946395 - 2947900 | 51394.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
