Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | I596_RS11885 | O34712 | Positive | 2926865 - 2927242 | 14132.0 |
| abc transporter atp-binding protein | I596_RS11890 | P54591 | Positive | 2927239 - 2928096 | 31642.7 |
| hypothetical protein | I596_RS11895 | Not Available | Positive | 2928093 - 2929067 | 35710.4 |
| hypothetical protein | I596_RS11900 | Not Available | Negative | 2929143 - 2929937 | 27778.2 |
| aspartate ammonia-lyase | I596_RS11910 | Q87DC2 | Negative | 2930181 - 2931575 | 49127.3 |
| hemolysin family protein | I596_RS11915 | O07589 | Positive | 2931709 - 2933016 | 48493.1 |
| adenylosuccinate lyase | I596_RS11920 | Q9I0K9 | Positive | 2933032 - 2934402 | 49792.5 |
| ferric iron uptake transcriptional regulator | I596_RS11925 | O68563 | Negative | 2934460 - 2934867 | 15595.7 |
| outer membrane protein assembly factor bame | I596_RS11930 | Q8PAL4 | Positive | 2935163 - 2935591 | 16092.3 |
| rnfh family protein | I596_RS11935 | Q15V26 | Negative | 2935582 - 2935881 | 11035.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
