Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilin | I596_RS11840 | P17416 | Positive | 2914492 - 2914962 | 16034.0 |
| pilin | I596_RS18110 | P36643 | Positive | 2915093 - 2915482 | 13080.0 |
| type iv-a pilus assembly atpase pilb | I596_RS11845 | P22608 | Positive | 2915670 - 2917385 | 61617.6 |
| type ii secretion system f family protein | I596_RS11850 | P22609 | Positive | 2917389 - 2918681 | 46665.9 |
| a24 family peptidase | I596_RS11855 | Q56763 | Positive | 2918681 - 2919547 | 31069.9 |
| efflux rnd transporter periplasmic adaptor subunit | I596_RS11860 | P25196 | Negative | 2919678 - 2920829 | 39484.3 |
| efflux rnd transporter permease subunit | I596_RS11865 | Not Available | Negative | 2920826 - 2924023 | 112951.0 |
| aldo/keto reductase | I596_RS11870 | A2XRZ0 | Negative | 2924239 - 2925252 | 36234.6 |
| arac family transcriptional regulator | I596_RS11875 | Q46855 | Positive | 2925414 - 2926328 | 33332.5 |
| hypothetical protein | I596_RS11880 | Not Available | Positive | 2926509 - 2926862 | 12076.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
