Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slp family lipoprotein | I596_RS11740 | Not Available | Negative | 2886653 - 2887228 | 20848.7 |
| duf3488 and transglutaminase-like domain-containing protein | I596_RS11745 | Q9HZX3 | Negative | 2887315 - 2889282 | 71997.2 |
| duf58 domain-containing protein | I596_RS11750 | Not Available | Negative | 2889279 - 2890262 | 35422.0 |
| moxr family atpase | I596_RS11755 | P94474 | Negative | 2890265 - 2891137 | 31237.9 |
| glycosyltransferase family 39 protein | I596_RS11760 | Not Available | Positive | 2891270 - 2892868 | 57390.5 |
| yjgn family protein | I596_RS11765 | Not Available | Positive | 2892965 - 2894089 | 41174.6 |
| m48 family metallopeptidase | I596_RS11770 | Not Available | Positive | 2894086 - 2895522 | 50422.7 |
| electron transfer flavoprotein subunit alpha/fixb family protein | I596_RS11775 | Q9HZP7 | Negative | 2895675 - 2896616 | 31453.0 |
| electron transfer flavoprotein subunit beta/fixa family protein | I596_RS11780 | P53575 | Negative | 2896616 - 2897362 | 26616.5 |
| rimk family alpha-l-glutamate ligase | I596_RS11785 | D2Z030 | Negative | 2898026 - 2898922 | 31600.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
