Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvrb | I596_RS11695 | Q8PJB1 | Negative | 2873513 - 2875549 | 76654.5 |
| gsph/fimt family protein | I596_RS11700 | Not Available | Positive | 2875792 - 2876337 | 18706.4 |
| Trna-asn | Not Available | Not Available | Positive | 2876410 - 2876485 | Not Available |
| tetratricopeptide repeat protein | I596_RS11710 | Not Available | Negative | 2876537 - 2879176 | 95501.1 |
| ecf-type sigma factor | I596_RS11715 | Not Available | Negative | 2879220 - 2879849 | 23373.8 |
| choice-of-anchor d domain-containing protein | I596_RS11720 | Not Available | Positive | 2880117 - 2883389 | 111925.0 |
| gnat family n-acetyltransferase | I596_RS11725 | Not Available | Positive | 2883980 - 2884447 | 16385.5 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | I596_RS19255 | Not Available | Negative | 2884826 - 2884978 | 5586.88 |
| cpbp family intramembrane glutamic endopeptidase | I596_RS11730 | Not Available | Negative | 2885267 - 2886112 | 30002.1 |
| hypothetical protein | I596_RS11735 | Not Available | Positive | 2886333 - 2886551 | 8168.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
