Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbbx protein | I596_RS11645 | Q04540 | Positive | 2862428 - 2863351 | 33881.8 |
| class 1 fructose-bisphosphatase | I596_RS11650 | Q479X4 | Positive | 2863410 - 2864495 | 40460.4 |
| phosphoribulokinase | I596_RS11655 | P19923 | Positive | 2864495 - 2865373 | 32884.4 |
| transketolase | I596_RS11660 | P21725 | Positive | 2865370 - 2867412 | 72700.5 |
| phosphoglycolate phosphatase | I596_RS11665 | P40852 | Positive | 2867622 - 2868323 | 23872.8 |
| class ii fructose-bisphosphate aldolase | I596_RS11670 | Q59100 | Positive | 2868354 - 2869424 | 38277.9 |
| ribulose-phosphate 3-epimerase | I596_RS11675 | P40117 | Positive | 2869436 - 2870137 | 24833.8 |
| right-handed parallel beta-helix repeat-containing protein | I596_RS11680 | Not Available | Negative | 2870225 - 2871121 | 30135.6 |
| Trna-val | Not Available | Not Available | Positive | 2871759 - 2871833 | Not Available |
| hypothetical protein | I596_RS11690 | Not Available | Positive | 2872123 - 2873472 | 46154.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
