Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | I596_RS11550 | P29267 | Negative | 2835485 - 2836405 | 33516.0 |
| sensor histidine kinase | I596_RS11555 | Not Available | Negative | 2836402 - 2837766 | 48118.5 |
| helix-turn-helix domain-containing protein | I596_RS11560 | Not Available | Positive | 2838002 - 2838259 | 9196.96 |
| type ii toxin-antitoxin system hipa family toxin | I596_RS11565 | P23874 | Positive | 2838219 - 2839604 | 51375.1 |
| hypothetical protein | I596_RS11570 | Not Available | Negative | 2839646 - 2840572 | 30940.8 |
| hypothetical protein | I596_RS11575 | Not Available | Negative | 2840572 - 2840895 | 10478.4 |
| hypothetical protein | I596_RS18490 | Not Available | Negative | 2841139 - 2841645 | 18890.6 |
| crispr-associated endonuclease cas2 | I596_RS11585 | Q2RW60 | Negative | 2846004 - 2846294 | 11004.3 |
| type i-c crispr-associated endonuclease cas1c | I596_RS11590 | Q2RW61 | Negative | 2846309 - 2847343 | 39161.6 |
| crispr-associated protein cas4 | I596_RS11595 | Not Available | Negative | 2847346 - 2847975 | 23769.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
