Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | I596_RS11500 | P0A115 | Positive | 2821209 - 2821877 | 23809.3 |
| hit domain-containing protein | I596_RS11505 | Not Available | Positive | 2821874 - 2822287 | 15168.1 |
| 5-oxoprolinase subunit pxpb | I596_RS11510 | P0AAV5 | Positive | 2822284 - 2822982 | 24047.0 |
| biotin-dependent carboxyltransferase family protein | I596_RS11515 | Q7WY77 | Positive | 2822979 - 2823938 | 33109.0 |
| lamb/ycsf family protein | I596_RS11520 | Q7WF01 | Positive | 2823935 - 2824693 | 26256.5 |
| hemolysin family protein | I596_RS11525 | P74409 | Negative | 2824749 - 2826059 | 47450.6 |
| lps-assembly protein lptd | I596_RS11530 | Q3BX79 | Positive | 2826385 - 2828673 | 86057.5 |
| winged helix-turn-helix domain-containing protein | I596_RS11535 | Not Available | Positive | 2828723 - 2831047 | 80612.6 |
| kelch repeat-containing protein | I596_RS11540 | Not Available | Positive | 2831188 - 2832354 | 39467.5 |
| choice-of-anchor i domain-containing protein | I596_RS11545 | Not Available | Negative | 2832551 - 2835379 | 98127.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
