Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilz domain-containing protein | I596_RS11395 | Not Available | Negative | 2804193 - 2804522 | 11941.1 |
| duf1631 family protein | I596_RS11400 | Not Available | Negative | 2804546 - 2806876 | 83438.5 |
| tonb-dependent receptor domain-containing protein | I596_RS11405 | A7ZUI6 | Negative | 2806974 - 2808776 | 65174.8 |
| hypothetical protein | I596_RS11410 | Not Available | Negative | 2809352 - 2810302 | 33151.3 |
| dna topoisomerase ib | I596_RS11415 | Q7T6X9 | Negative | 2810498 - 2811628 | 42113.9 |
| duf6496 domain-containing protein | I596_RS18980 | Not Available | Negative | 2811840 - 2812328 | 16863.2 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS18985 | Not Available | Negative | 2812654 - 2813466 | 29377.9 |
| redox-sensitive transcriptional activator soxr | I596_RS11435 | P0ACS3 | Negative | 2813593 - 2814045 | 16142.4 |
| nadph-dependent fmn reductase | I596_RS11440 | Q9USJ6 | Positive | 2814111 - 2814749 | 22927.3 |
| duf1993 family protein | I596_RS11445 | Not Available | Positive | 2814887 - 2815393 | 18037.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
