Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reprolysin-like metallopeptidase | I596_RS19200 | Not Available | Positive | 2789976 - 2792849 | 98226.9 |
| pqq-dependent sugar dehydrogenase | I596_RS11350 | P75804 | Positive | 2793774 - 2794958 | 42260.2 |
| tigr03862 family flavoprotein | I596_RS11355 | Not Available | Positive | 2794996 - 2796258 | 44353.3 |
| glycosyltransferase family 39 protein | I596_RS11360 | B4ETL9 | Positive | 2796378 - 2797940 | 57054.5 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | I596_RS11365 | P0ACV1 | Negative | 2797934 - 2798854 | 34087.8 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | I596_RS11370 | P0AC77 | Positive | 2798987 - 2800303 | 48648.0 |
| tolc family outer membrane protein | I596_RS11375 | P02930 | Negative | 2800305 - 2801690 | 49614.9 |
| protein-l-isoaspartate o-methyltransferase | I596_RS11380 | B1ZJW1 | Negative | 2801734 - 2802393 | 23990.0 |
| hypothetical protein | I596_RS11385 | Not Available | Negative | 2802674 - 2803225 | 19329.1 |
| tetr/acrr family transcriptional regulator | I596_RS11390 | Not Available | Positive | 2803506 - 2804168 | 24098.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
