Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | I596_RS11295 | Q9VGR2 | Positive | 2778637 - 2779860 | 44266.7 |
| ydcf family protein | I596_RS11300 | Not Available | Positive | 2779874 - 2780650 | 27581.3 |
| multifunctional cca addition/repair protein | I596_RS11305 | Q4UYN8 | Negative | 2780658 - 2781884 | 44263.5 |
| class iii poly(r)-hydroxyalkanoic acid synthase subunit phac | I596_RS11310 | P45370 | Negative | 2781936 - 2783000 | 40099.1 |
| class iii poly(r)-hydroxyalkanoic acid synthase subunit phae | I596_RS11315 | Not Available | Negative | 2783010 - 2784206 | 42619.5 |
| sigma-54-dependent fis family transcriptional regulator | I596_RS11320 | P28614 | Positive | 2784550 - 2786523 | 72348.5 |
| histidine triad nucleotide-binding protein | I596_RS11325 | P44956 | Negative | 2786602 - 2786946 | 12493.0 |
| recombination mediator recr | I596_RS11330 | Q8PNG0 | Negative | 2786954 - 2787562 | 21508.1 |
| ybab/ebfc family nucleoid-associated protein | I596_RS11335 | Q0A8H9 | Negative | 2787562 - 2787885 | 11570.0 |
| dna polymerase iii subunit gamma/tau | I596_RS11340 | P74876 | Negative | 2788123 - 2789769 | 58695.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
