Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4153 domain-containing protein | I596_RS01095 | P45804 | Negative | 278006 - 279826 | 66495.0 |
| class a beta-lactamase | I596_RS01100 | P96465 | Negative | 279991 - 280878 | 31463.8 |
| lysr family transcriptional regulator | I596_RS01105 | P24734 | Positive | 280977 - 281858 | 31675.3 |
| tetratricopeptide repeat protein | I596_RS01110 | Q9I3M9 | Negative | 281915 - 283156 | 43082.3 |
| cytochrome c-type biogenesis protein | I596_RS01115 | P52226 | Negative | 283153 - 283593 | 16322.7 |
| dsbe family thiol:disulfide interchange protein | I596_RS01120 | Q46476 | Negative | 283590 - 284138 | 20101.4 |
| heme lyase ccmf/nrfe family subunit | I596_RS01125 | Q9I3N2 | Negative | 284135 - 286096 | 70721.5 |
| arac family transcriptional regulator | I596_RS01130 | Not Available | Negative | 286260 - 287156 | 32360.2 |
| duf2063 domain-containing protein | I596_RS01135 | Not Available | Negative | 287260 - 288042 | 28095.7 |
| duf692 domain-containing protein | I596_RS01140 | A7HAL6 | Negative | 288039 - 288887 | 30794.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
