Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clpxp protease specificity-enhancing factor | I596_RS11195 | P0AFZ4 | Positive | 2759911 - 2760318 | 14660.6 |
| signal peptide peptidase sppa | I596_RS11200 | Q8Z6F3 | Positive | 2760481 - 2762322 | 66572.7 |
| tryptophan--trna ligase | I596_RS11205 | Q9HVX6 | Positive | 2762340 - 2763761 | 50874.6 |
| trna dihydrouridine synthase dusb | I596_RS11210 | Q8PCH1 | Negative | 2764186 - 2765184 | 35738.1 |
| deda family protein | I596_RS11215 | P45280 | Positive | 2765426 - 2766127 | 25753.2 |
| 6-carboxytetrahydropterin synthase qued | I596_RS11220 | P65871 | Positive | 2766199 - 2766564 | 13495.2 |
| chalcone isomerase family protein | I596_RS11225 | Not Available | Positive | 2766554 - 2767189 | 23790.0 |
| phasin family protein | I596_RS11230 | Not Available | Positive | 2767397 - 2767837 | 15922.9 |
| threonine synthase | I596_RS11235 | P27735 | Negative | 2767961 - 2769253 | 44738.2 |
| homoserine kinase | I596_RS11240 | Q8P9Q0 | Negative | 2769250 - 2770194 | 32266.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
